nr |
titel |
auteur |
tijdschrift |
jaar |
jaarg. |
afl. |
pagina('s) |
type |
1 |
A BAC clone fingerprinting approach to the detection of human genome rearrangements
|
Krzywinski, Martin |
|
2007 |
|
10 |
|
artikel |
2 |
A catalog of stability-associated sequence elements in 3' UTRs of yeast mRNAs
|
Shalgi, Reut |
|
2005 |
|
10 |
|
artikel |
3 |
A compiled and systematic reference map of nucleosome positions across the Saccharomyces cerevisiae genome
|
Jiang, Cizhong |
|
2009 |
|
10 |
|
artikel |
4 |
A comprehensive transcript index of the human genome generated using microarrays and computational approaches
|
Schadt, Eric E |
|
2004 |
|
10 |
|
artikel |
5 |
A consensus prognostic gene expression classifier for ER positive breast cancer
|
Teschendorff, Andrew E |
|
2006 |
|
10 |
|
artikel |
6 |
Adaptation of Rhizobium leguminosarum to pea, alfalfa and sugar beet rhizospheres investigated by comparative transcriptomics
|
Ramachandran, Vinoy K |
|
2011 |
|
10 |
|
artikel |
7 |
Adult midgut expressed sequence tags from the tsetse fly Glossina morsitans morsitans and expression analysis of putative immune response genes
|
Lehane, M J |
|
2003 |
|
10 |
|
artikel |
8 |
A genetic code alteration generates a proteome of high diversity in the human pathogen Candida albicans
|
Gomes, Ana C |
|
2007 |
|
10 |
|
artikel |
9 |
A genome annotation-driven approach to cloning the human ORFeome
|
Collins, John E |
|
2004 |
|
10 |
|
artikel |
10 |
A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection
|
Greenall, Amanda |
|
2008 |
|
10 |
|
artikel |
11 |
Aging effects on DNA methylation modules in human brain and blood tissue
|
Horvath, Steve |
|
2012 |
|
10 |
|
artikel |
12 |
A high performance test of differential gene expression for oligonucleotide arrays
|
Lemon, William J |
|
2003 |
|
10 |
|
artikel |
13 |
All duplicates are not equal: the difference between small-scale and genome duplication
|
Hakes, Luke |
|
2007 |
|
10 |
|
artikel |
14 |
Allele-specific copy number analysis of tumor samples with aneuploidy and tumor heterogeneity
|
Rasmussen, Markus |
|
2011 |
|
10 |
|
artikel |
15 |
ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads
|
MacCallum, Iain |
|
2009 |
|
10 |
|
artikel |
16 |
Alternative splicing of mouse transcription factors affects their DNA-binding domain architecture and is tissue specific
|
Taneri, Bahar |
|
2004 |
|
10 |
|
artikel |
17 |
Analysis of EF-hand-containing proteins in Arabidopsis
|
Day, Irene S |
|
2002 |
|
10 |
p. research0056.1-research0056.24 |
artikel |
18 |
Analysis of strain and regional variation in gene expression in mouse brain
|
Pavlidis, Paul |
|
2001 |
|
10 |
p. research0042.1-research0042.15 |
artikel |
19 |
An atlas of bovine gene expression reveals novel distinctive tissue characteristics and evidence for improving genome annotation
|
Harhay, Gregory P |
|
2010 |
|
10 |
|
artikel |
20 |
Ancient genomic architecture for mammalian olfactory receptor clusters
|
Aloni, Ronny |
|
2006 |
|
10 |
|
artikel |
21 |
An integrated database of genes responsive to the Myc oncogenic transcription factor: identification of direct genomic targets
|
Zeller, Karen I |
|
2003 |
|
10 |
|
artikel |
22 |
An inventory of yeast proteins associated with nucleolar and ribosomal components
|
Staub, Eike |
|
2006 |
|
10 |
|
artikel |
23 |
Annotation and analysis of 10,000 expressed sequence tags from developing mouse eye and adult retina
|
Yu, Jindan |
|
2003 |
|
10 |
|
artikel |
24 |
An optimization framework for unsupervised identification of rare copy number variation from SNP array data
|
Yavaş, Gökhan |
|
2009 |
|
10 |
|
artikel |
25 |
A reverse genetic screen in Drosophila using a deletion-inducing mutagen
|
Nairz, Knud |
|
2004 |
|
10 |
|
artikel |
26 |
A scale of functional divergence for yeast duplicated genes revealed from analysis of the protein-protein interaction network
|
Baudot, Anaïs |
|
2004 |
|
10 |
|
artikel |
27 |
A screen for hydroxymethylcytosine and formylcytosine binding proteins suggests functions in transcription and chromatin regulation
|
Iurlaro, Mario |
|
2013 |
|
10 |
|
artikel |
28 |
A simple, fast, and accurate method of phylogenomic inference
|
Wu, Martin |
|
2008 |
|
10 |
|
artikel |
29 |
Asymmetric directional mutation pressures in bacteria
|
Lobry, Jean R |
|
2002 |
|
10 |
p. research0058.1-research0058.14 |
artikel |
30 |
AVISPA: a web tool for the prediction and analysis of alternative splicing
|
Barash, Yoseph |
|
2013 |
|
10 |
|
artikel |
31 |
BatMeth: improved mapper for bisulfite sequencing reads on DNA methylation
|
Lim, Jing-Quan |
|
2012 |
|
10 |
|
artikel |
32 |
Bet hedging in the underworld
|
Zhang, Xue-Xian |
|
2010 |
|
10 |
|
artikel |
33 |
Bioconductor: open software development for computational biology and bioinformatics
|
Gentleman, Robert C |
|
2004 |
|
10 |
|
artikel |
34 |
Boolean implication networks derived from large scale, whole genome microarray datasets
|
Sahoo, Debashis |
|
2008 |
|
10 |
|
artikel |
35 |
Breaking the waves: improved detection of copy number variation from microarray-based comparative genomic hybridization
|
Marioni, John C |
|
2007 |
|
10 |
|
artikel |
36 |
BSmooth: from whole genome bisulfite sequencing reads to differentially methylated regions
|
Hansen, Kasper D |
|
2012 |
|
10 |
|
artikel |
37 |
Caste- and development-associated gene expression in a lower termite
|
Scharf, Michael E |
|
2003 |
|
10 |
|
artikel |
38 |
Cell-cycle regulated transcription associates with DNA replication timing in yeast and human
|
Fraser, Hunter B |
|
2013 |
|
10 |
|
artikel |
39 |
CellProfiler: image analysis software for identifying and quantifying cell phenotypes
|
Carpenter, Anne E |
|
2006 |
|
10 |
|
artikel |
40 |
CHANCE: comprehensive software for quality control and validation of ChIP-seq data
|
Diaz, Aaron |
|
2012 |
|
10 |
|
artikel |
41 |
Changes in gene expression during the development of mammary tumors in MMTV-Wnt-1 transgenic mice
|
Huang, Shixia |
|
2005 |
|
10 |
|
artikel |
42 |
Changes in protein expression during honey bee larval development
|
Chan, Queenie WT |
|
2008 |
|
10 |
|
artikel |
43 |
Characterization of alternatively spliced products and tissue-specific isoforms of USP28 and USP25
|
Valero, Rebeca |
|
2001 |
|
10 |
p. research0043.1-research0043.10 |
artikel |
44 |
Chlamydia trachomatis diversity viewed as a tissue-specific coevolutionary arms race
|
Nunes, Alexandra |
|
2008 |
|
10 |
|
artikel |
45 |
Chromatin accessibility reveals insights into androgen receptor activation and transcriptional specificity
|
Tewari, Alok K |
|
2012 |
|
10 |
|
artikel |
46 |
Chromothripsis is a common mechanism driving genomic rearrangements in primary and metastatic colorectal cancer
|
Kloosterman, Wigard P |
|
2011 |
|
10 |
|
artikel |
47 |
Common gene expression strategies revealed by genome-wide analysis in yeast
|
García-Martínez, José |
|
2007 |
|
10 |
|
artikel |
48 |
Comparative and functional genomics reveals genetic diversity and determinants of host specificity among reference strains and a large collection of Chinese isolates of the phytopathogen Xanthomonas campestris pv. campestris
|
He, Yong-Qiang |
|
2007 |
|
10 |
|
artikel |
49 |
Comparative genomic analysis of fungal genomes reveals intron-rich ancestors
|
Stajich, Jason E |
|
2007 |
|
10 |
|
artikel |
50 |
Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control
|
Coyne, Robert S |
|
2011 |
|
10 |
|
artikel |
51 |
Comparative phosphoproteomics reveals evolutionary and functional conservation of phosphorylation across eukaryotes
|
Boekhorst, Jos |
|
2008 |
|
10 |
|
artikel |
52 |
Comparative sequence analyses reveal sites of ancestral chromosomal fusions in the Indian muntjac genome
|
Tsipouri, Vicky |
|
2008 |
|
10 |
|
artikel |
53 |
Comparative transcriptomics among floral organs of the basal eudicot Eschscholzia californica as reference for floral evolutionary developmental studies
|
Zahn, Laura M |
|
2010 |
|
10 |
|
artikel |
54 |
Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species
|
Rey, Michael W |
|
2004 |
|
10 |
|
artikel |
55 |
Conservation of long-range synteny and microsynteny between the genomes of two distantly related nematodes
|
Guiliano, DB |
|
2002 |
|
10 |
p. research0057.1-research0057.14 |
artikel |
56 |
Contribution of the epigenetic mark H3K27me3 to functional divergence after whole genome duplication in Arabidopsis
|
Berke, Lidija |
|
2012 |
|
10 |
|
artikel |
57 |
Cytosine methylation and hydroxymethylation mark DNA for elimination in Oxytricha trifallax
|
Bracht, John R |
|
2012 |
|
10 |
|
artikel |
58 |
Cytosine methylation changes in enhancer regions of core pro-fibrotic genes characterize kidney fibrosis development
|
Ko, Yi-An |
|
2013 |
|
10 |
|
artikel |
59 |
Deep short-read sequencing of chromosome 17 from the mouse strains A/J and CAST/Ei identifies significant germline variation and candidate genes that regulate liver triglyceride levels
|
Sudbery, Ian |
|
2009 |
|
10 |
|
artikel |
60 |
Defining the chromatin signature of inducible genes in T cells
|
Lim, Pek S |
|
2009 |
|
10 |
|
artikel |
61 |
Detecting sequence polymorphisms associated with meiotic recombination hotspots in the human genome
|
Zheng, Jie |
|
2010 |
|
10 |
|
artikel |
62 |
Development of a method for screening short-lived proteins using green fluorescent protein
|
Jiang, Xin |
|
2004 |
|
10 |
|
artikel |
63 |
DiagHunter and GenoPix2D: programs for genomic comparisons, large-scale homology discovery and visualization
|
Cannon, Steven B |
|
2003 |
|
10 |
|
artikel |
64 |
Differential DNA methylation in discrete developmental stages of the parasitic nematode Trichinella spiralis
|
Gao, Fei |
|
2012 |
|
10 |
|
artikel |
65 |
Differential expression analysis for sequence count data
|
Anders, Simon |
|
2010 |
|
10 |
|
artikel |
66 |
Distinct transcriptional MYCN/c-MYC activities are associated with spontaneous regression or malignant progression in neuroblastomas
|
Westermann, Frank |
|
2008 |
|
10 |
|
artikel |
67 |
Divergent evolution of arrested development in the dauer stage of Caenorhabditis elegans and the infective stage of Heterodera glycines
|
Elling, Axel A |
|
2007 |
|
10 |
|
artikel |
68 |
DNA methylation age of human tissues and cell types
|
Horvath, Steve |
|
2013 |
|
10 |
|
artikel |
69 |
Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions
|
Corradi, Nicolas |
|
2009 |
|
10 |
|
artikel |
70 |
Dynamic evolution of selenocysteine utilization in bacteria: a balance between selenoprotein loss and evolution of selenocysteine from redox active cysteine residues
|
Zhang, Yan |
|
2006 |
|
10 |
|
artikel |
71 |
Enhanced top-down characterization of histone post-translational modifications
|
Tian, Zhixin |
|
2012 |
|
10 |
|
artikel |
72 |
Enrichment of sequencing targets from the human genome by solution hybridization
|
Tewhey, Ryan |
|
2009 |
|
10 |
|
artikel |
73 |
EpiExplorer: live exploration and global analysis of large epigenomic datasets
|
Halachev, Konstantin |
|
2012 |
|
10 |
|
artikel |
74 |
Epigenetic interplay between mouse endogenous retroviruses and host genes
|
Rebollo, Rita |
|
2012 |
|
10 |
|
artikel |
75 |
Epigenetic transgenerational inheritance of somatic transcriptomes and epigenetic controlregions
|
Skinner, Michael K |
|
2012 |
|
10 |
|
artikel |
76 |
EXCAVATOR: detecting copy number variants from whole-exome sequencing data
|
Magi, Alberto |
|
2013 |
|
10 |
|
artikel |
77 |
Explicit equilibrium modeling of transcription-factor binding and gene regulation
|
Granek, Joshua A |
|
2005 |
|
10 |
|
artikel |
78 |
Finding disease candidate genes by liquid association
|
Li, Ker-Chau |
|
2007 |
|
10 |
|
artikel |
79 |
Functional architecture of Escherichia coli: new insights provided by a natural decomposition approach
|
Freyre-González, Julio A |
|
2008 |
|
10 |
|
artikel |
80 |
FusionSeq: a modular framework for finding gene fusions by analyzing paired-end RNA-sequencing data
|
Sboner, Andrea |
|
2010 |
|
10 |
|
artikel |
81 |
Gel-free multiplexed reduced representation bisulfite sequencing for large-scale DNA methylation profiling
|
Boyle, Patrick |
|
2012 |
|
10 |
|
artikel |
82 |
Gene expression profiling of Hfe-/- liver and duodenum in mouse strains with differing susceptibilities to iron loading: identification of transcriptional regulatory targets of Hfe and potential hemochromatosis modifiers
|
Coppin, Hélène |
|
2007 |
|
10 |
|
artikel |
83 |
Genetic subtraction profiling identifies genes essential for Arabidopsis reproduction and reveals interaction between the female gametophyte and the maternal sporophyte
|
Johnston, Amal J |
|
2007 |
|
10 |
|
artikel |
84 |
Genome-wide analysis of condensin binding in Caenorhabditis elegans
|
Kranz, Anna-Lena |
|
2013 |
|
10 |
|
artikel |
85 |
Genome-wide comparative analysis of the Brassica rapa gene space reveals genome shrinkage and differential loss of duplicated genes after whole genome triplication
|
Mun, Jeong-Hwan |
|
2009 |
|
10 |
|
artikel |
86 |
Genome-wide incorporation dynamics reveal distinct categories of turnover for the histone variant H3.3
|
Kraushaar, Daniel C |
|
2013 |
|
10 |
|
artikel |
87 |
Genome-wide mutagenesis of Zea mays L. using RescueMu transposons
|
Fernandes, John |
|
2004 |
|
10 |
|
artikel |
88 |
Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers
|
Decock, Anneleen |
|
2012 |
|
10 |
|
artikel |
89 |
Genomic analysis of membrane protein families: abundance and conserved motifs
|
Liu, Yang |
|
2002 |
|
10 |
p. research0054.1-research0054.12 |
artikel |
90 |
Genomic analysis reveals that Pseudomonas aeruginosa virulence is combinatorial
|
Lee, Daniel G |
|
2006 |
|
10 |
|
artikel |
91 |
Genomic DNA k-mer spectra: models and modalities
|
Chor, Benny |
|
2009 |
|
10 |
|
artikel |
92 |
Genomic neighborhoods for Arabidopsis retrotransposons: a role for targeted integration in the distribution of the Metaviridae
|
Peterson-Burch, Brooke D |
|
2004 |
|
10 |
|
artikel |
93 |
Genomic-scale measurement of mRNA turnover and the mechanisms of action of the anti-cancer drug flavopiridol
|
Lam, Lloyd T |
|
2001 |
|
10 |
p. research0041.1-research0041.11 |
artikel |
94 |
Global analysis of mRNA stability in the archaeon Sulfolobus
|
Andersson, Anders F |
|
2006 |
|
10 |
|
artikel |
95 |
Harnessing naturally randomized transcription to infer regulatory relationships among genes
|
Chen, Lin S |
|
2007 |
|
10 |
|
artikel |
96 |
H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions
|
Ku, Manching |
|
2012 |
|
10 |
|
artikel |
97 |
Heterochronic evolution reveals modular timing changes in budding yeast transcriptomes
|
Simola, Daniel F |
|
2010 |
|
10 |
|
artikel |
98 |
High-efficiency RNA cloning enables accurate quantification of miRNA expression by deep sequencing
|
Zhang, Zhaojie |
|
2013 |
|
10 |
|
artikel |
99 |
High-resolution aCGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer
|
Chin, Suet F |
|
2007 |
|
10 |
|
artikel |
100 |
High-throughput RNA interference screening using pooled shRNA libraries and next generation sequencing
|
Sims, David |
|
2011 |
|
10 |
|
artikel |
101 |
Host origin of plastid solute transporters in the first photosynthetic eukaryotes
|
Tyra, Heather M |
|
2007 |
|
10 |
|
artikel |
102 |
Identification of CDK2 substrates in human cell lysates
|
Chi, Yong |
|
2008 |
|
10 |
|
artikel |
103 |
Identifying biological themes within lists of genes with EASE
|
Hosack, Douglas A |
|
2003 |
|
10 |
|
artikel |
104 |
Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations
|
Satou, Yutaka |
|
2008 |
|
10 |
|
artikel |
105 |
Improved variant discovery through local re-alignment of short-read next-generation sequencing data using SRMA
|
Homer, Nils |
|
2010 |
|
10 |
|
artikel |
106 |
Independent centromere formation in a capricious, gene-free domain of chromosome 13q21 in Old World monkeys and pigs
|
Cardone, Maria Francesca |
|
2006 |
|
10 |
|
artikel |
107 |
Inferring protein domain interactions from databases of interacting proteins
|
Riley, Robert |
|
2005 |
|
10 |
|
artikel |
108 |
Insertion bias and purifying selection of retrotransposons in the Arabidopsis thaliana genome
|
Pereira, Vini |
|
2004 |
|
10 |
|
artikel |
109 |
Integrating diverse genomic data using gene sets
|
Tyekucheva, Svitlana |
|
2011 |
|
10 |
|
artikel |
110 |
Long terminal repeat retrotransposons of Oryza sativa
|
McCarthy, Eugene M |
|
2002 |
|
10 |
p. research0053.1-research0053.11 |
artikel |
111 |
MethMarker: user-friendly design and optimization of gene-specific DNA methylation assays
|
Schüffler, Peter |
|
2009 |
|
10 |
|
artikel |
112 |
methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles
|
Akalin, Altuna |
|
2012 |
|
10 |
|
artikel |
113 |
MicroRNA expression profiling of human breast cancer identifies new markers of tumor subtype
|
Blenkiron, Cherie |
|
2007 |
|
10 |
|
artikel |
114 |
Mining microarray expression data by literature profiling
|
Chaussabel, Damien |
|
2002 |
|
10 |
p. research0055.1-research0055.16 |
artikel |
115 |
Mining the Arabidopsis thaliana genome for highly-divergent seven transmembrane receptors
|
Moriyama, Etsuko N |
|
2006 |
|
10 |
|
artikel |
116 |
Modeling precision treatment of breast cancer
|
Daemen, Anneleen |
|
2013 |
|
10 |
|
artikel |
117 |
Molecular archeology of L1 insertions in the human genome
|
Szak, Suzanne T |
|
2002 |
|
10 |
p. research0052.1-research0052.18 |
artikel |
118 |
Molecular networks involved in mouse cerebral corticogenesis and spatio-temporal regulation of Sox4 and Sox11 novel antisense transcripts revealed by transcriptome profiling
|
Ling, King-Hwa |
|
2009 |
|
10 |
|
artikel |
119 |
NeMeSys: a biological resource for narrowing the gap between sequence and function in the human pathogen Neisseria meningitidis
|
Rusniok, Christophe |
|
2009 |
|
10 |
|
artikel |
120 |
Non-genotoxic carcinogen exposure induces defined changes in the 5-hydroxymethylome
|
Thomson, John P |
|
2012 |
|
10 |
|
artikel |
121 |
On the association between chromosomal rearrangements and genic evolution in humans and chimpanzees
|
Marques-Bonet, Tomàs |
|
2007 |
|
10 |
|
artikel |
122 |
Open-Phylo: a customizable crowd-computing platform for multiple sequence alignment
|
Kwak, Daniel |
|
2013 |
|
10 |
|
artikel |
123 |
Optimization of oligonucleotide arrays and RNA amplification protocols for analysis of transcript structure and alternative splicing
|
Castle, John |
|
2003 |
|
10 |
|
artikel |
124 |
Pathway and gene-set activation measurement from mRNA expression data: the tissue distribution of human pathways
|
Levine, David M |
|
2006 |
|
10 |
|
artikel |
125 |
PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation
|
Portales-Casamar, Elodie |
|
2007 |
|
10 |
|
artikel |
126 |
Perturbation of gene expression of the chromatin remodeling pathway in premature newborns at risk for bronchopulmonary dysplasia
|
Cohen, Jennifer |
|
2007 |
|
10 |
|
artikel |
127 |
Phenotypic and transcriptional response to selection for alcohol sensitivity in Drosophila melanogaster
|
Morozova, Tatiana V |
|
2007 |
|
10 |
|
artikel |
128 |
Phylogenetic simulation of promoter evolution: estimation and modeling of binding site turnover events and assessment of their impact on alignment tools
|
Huang, Weichun |
|
2007 |
|
10 |
|
artikel |
129 |
Prediction of trans-antisense transcripts in Arabidopsis thaliana
|
Wang, Huan |
|
2006 |
|
10 |
|
artikel |
130 |
Preferential binding of HIF-1 to transcriptionally active loci determines cell-type specific response to hypoxia
|
Xia, Xiaobo |
|
2009 |
|
10 |
|
artikel |
131 |
Rapid haplotype inference for nuclear families
|
Williams, Amy L |
|
2010 |
|
10 |
|
artikel |
132 |
Rapid identification of PAX2/5/8 direct downstream targets in the otic vesicle by combinatorial use of bioinformatics tools
|
Ramialison, Mirana |
|
2008 |
|
10 |
|
artikel |
133 |
Relating tissue specialization to the differentiation of expression of singleton and duplicate mouse proteins
|
Freilich, Shiri |
|
2006 |
|
10 |
|
artikel |
134 |
Responses of hyperthermophilic crenarchaea to UV irradiation
|
Götz, Dorothee |
|
2007 |
|
10 |
|
artikel |
135 |
Searching for differentially expressed gene combinations
|
Dettling, Marcel |
|
2005 |
|
10 |
|
artikel |
136 |
Sequence and structural analysis of BTB domain proteins
|
Stogios, Peter J |
|
2005 |
|
10 |
|
artikel |
137 |
Sequence signatures extracted from proximal promoters can be used to predict distal enhancers
|
Taher, Leila |
|
2013 |
|
10 |
|
artikel |
138 |
Simplified ontologies allowing comparison of developmental mammalian gene expression
|
Kruger, Adele |
|
2007 |
|
10 |
|
artikel |
139 |
Simultaneous transcription of duplicated var2csa gene copies in individual Plasmodium falciparum parasites
|
Brolin, Kim JM |
|
2009 |
|
10 |
|
artikel |
140 |
Somatic structural rearrangements in genetically engineered mouse mammary tumors
|
Varela, Ignacio |
|
2010 |
|
10 |
|
artikel |
141 |
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