| nr |
titel |
auteur |
tijdschrift |
jaar |
jaarg. |
afl. |
pagina('s) |
type |
| 1 |
A knowledge-based structure-discriminating function that requires only main-chain atom coordinates
|
Makino, Yoshihide
|
|
2008
|
8 |
1 |
|
artikel
|
| 2 |
Alternating evolutionary pressure in a genetic algorithm facilitates protein model selection
|
Offman, Marc N
|
|
2008
|
8 |
1 |
|
artikel
|
| 3 |
A method for probabilistic mapping between protein structure and function taxonomies through cross training
|
Gupta, Kshitiz
|
|
2008
|
8 |
1 |
|
artikel
|
| 4 |
A multi-template combination algorithm for protein comparative modeling
|
Cheng, Jianlin
|
|
2008
|
8 |
1 |
|
artikel
|
| 5 |
Analysis on conservation of disulphide bonds and their structural features in homologous protein domain families
|
Thangudu, Ratna R
|
|
2008
|
8 |
1 |
|
artikel
|
| 6 |
Charge environments around phosphorylation sites in proteins
|
Kitchen, James
|
|
2008
|
8 |
1 |
|
artikel
|
| 7 |
Comparative modelling by restraint-based conformational sampling
|
Furnham, Nicholas
|
|
2008
|
8 |
1 |
|
artikel
|
| 8 |
Contact prediction in protein modeling: Scoring, folding and refinement of coarse-grained models
|
Latek, Dorota
|
|
2008
|
8 |
1 |
|
artikel
|
| 9 |
Crystal structure of human IPS-1/MAVS/VISA/Cardif caspase activation recruitment domain
|
Potter, Jane A
|
|
2008
|
8 |
1 |
|
artikel
|
| 10 |
Crystal structures of a purple acid phosphatase, representing different steps of this enzyme's catalytic cycle
|
Schenk, Gerhard
|
|
2008
|
8 |
1 |
|
artikel
|
| 11 |
Crystal structures of PI3K-C2α PX domain indicate conformational change associated with ligand binding
|
Parkinson, Gary N
|
|
2008
|
8 |
1 |
|
artikel
|
| 12 |
CUSP: an algorithm to distinguish structurally conserved and unconserved regions in protein domain alignments and its application in the study of large length variations
|
Sandhya, Sankaran
|
|
2008
|
8 |
1 |
|
artikel
|
| 13 |
Distantly related lipocalins share two conserved clusters of hydrophobic residues: use in homology modeling
|
Adam, Benoit
|
|
2008
|
8 |
1 |
|
artikel
|
| 14 |
Docking of molecules identified in bioactive medicinal plants extracts into the p50 NF-kappaB transcription factor: correlation with inhibition of NF-kappaB/DNA interactions and inhibitory effects on IL-8 gene expression
|
Piccagli, Laura
|
|
2008
|
8 |
1 |
|
artikel
|
| 15 |
Donor substrate recognition in the raffinose-bound E342A mutant of fructosyltransferase Bacillus subtilis levansucrase
|
Meng, Guoyu
|
|
2008
|
8 |
1 |
|
artikel
|
| 16 |
Exploring allosteric coupling in the α-subunit of Heterotrimeric G proteins using evolutionary and ensemble-based approaches
|
Sayar, Kemal
|
|
2008
|
8 |
1 |
|
artikel
|
| 17 |
Fast dynamics perturbation analysis for prediction of protein functional sites
|
Ming, Dengming
|
|
2008
|
8 |
1 |
|
artikel
|
| 18 |
Flanking p10 contribution and sequence bias in matrix based epitope prediction: revisiting the assumption of independent binding pockets
|
Parry, Christian S
|
|
2008
|
8 |
1 |
|
artikel
|
| 19 |
GANDivAWeb: A web server for detecting early folding units ("foldons") from protein 3D structures
|
Laborde, Thomas
|
|
2008
|
8 |
1 |
|
artikel
|
| 20 |
Graphical analysis of NMR structural quality and interactive contact map of NOE assignments in ARIA
|
Bardiaux, Benjamin
|
|
2008
|
8 |
1 |
|
artikel
|
| 21 |
HOLLOW: Generating Accurate Representations of Channel and Interior Surfaces in Molecular Structures
|
Ho, Bosco K
|
|
2008
|
8 |
1 |
|
artikel
|
| 22 |
"Hot cores" in proteins: Comparative analysis of the apolar contact area in structures from hyper/thermophilic and mesophilic organisms
|
Paiardini, Alessandro
|
|
2008
|
8 |
1 |
|
artikel
|
| 23 |
Identification of new, well-populated amino-acid sidechain rotamers involving hydroxyl-hydrogen atoms and sulfhydryl-hydrogen atoms
|
Ho, Bosco K
|
|
2008
|
8 |
1 |
|
artikel
|
| 24 |
Improving the accuracy of template-based predictions by mixing and matching between initial models
|
Liu, Tianyun
|
|
2008
|
8 |
1 |
|
artikel
|
| 25 |
Interaction between the C-terminal region of human myelin basic protein and calmodulin: analysis of complex formation and solution structure
|
Majava, Viivi
|
|
2008
|
8 |
1 |
|
artikel
|
| 26 |
Interactions between the quality control ubiquitin ligase CHIP and ubiquitin conjugating enzymes
|
Xu, Zhen
|
|
2008
|
8 |
1 |
|
artikel
|
| 27 |
K2D2: Estimation of protein secondary structure from circular dichroism spectra
|
Perez-Iratxeta, Carolina
|
|
2008
|
8 |
1 |
|
artikel
|
| 28 |
Knottin cyclization: impact on structure and dynamics
|
Heitz, Annie
|
|
2008
|
8 |
1 |
|
artikel
|
| 29 |
Ligand-induced conformational changes in a thermophilic ribose-binding protein
|
Cuneo, Matthew J
|
|
2008
|
8 |
1 |
|
artikel
|
| 30 |
LRRML: a conformational database and an XML description of leucine-rich repeats (LRRs)
|
Wei, Tiandi
|
|
2008
|
8 |
1 |
|
artikel
|
| 31 |
Modeling structure and flexibility of Candida antarctica lipase B in organic solvents
|
Trodler, Peter
|
|
2008
|
8 |
1 |
|
artikel
|
| 32 |
Multiple molecular dynamics simulation of the isoforms of human translation elongation factor 1A reveals reversible fluctuations between "open" and "closed" conformations and suggests specific for eEF1A1 affinity for Ca2+-calmodulin
|
Kanibolotsky, Dmitry S
|
|
2008
|
8 |
1 |
|
artikel
|
| 33 |
PDBalert: automatic, recurrent remote homology tracking and protein structure prediction
|
Agarwal, Vatsal
|
|
2008
|
8 |
1 |
|
artikel
|
| 34 |
pi-Turns: types, systematics and the context of their occurrence in protein structures
|
Dasgupta, Bhaskar
|
|
2008
|
8 |
1 |
|
artikel
|
| 35 |
Prediction of structural stability of short beta-hairpin peptides by molecular dynamics and knowledge-based potentials
|
Noy, Karin
|
|
2008
|
8 |
1 |
|
artikel
|
| 36 |
Preservation of protein clefts in comparative models
|
Piedra, David
|
|
2008
|
8 |
1 |
|
artikel
|
| 37 |
Protecting role of cosolvents in protein denaturation by SDS: a structural study
|
Michaux, Catherine
|
|
2008
|
8 |
1 |
|
artikel
|
| 38 |
Protein Functional Surfaces: Global Shape Matching and Local Spatial Alignments of Ligand Binding Sites
|
Binkowski, T Andrew
|
|
2008
|
8 |
1 |
|
artikel
|
| 39 |
Protein-segment universe exhibiting transitions at intermediate segment length in conformational subspaces
|
Ikeda, Kazuyoshi
|
|
2008
|
8 |
1 |
|
artikel
|
| 40 |
PSAIA – Protein Structure and Interaction Analyzer
|
Mihel, Josip
|
|
2008
|
8 |
1 |
|
artikel
|
| 41 |
Quantifying information transfer by protein domains: Analysis of the Fyn SH2 domain structure
|
Lenaerts, Tom
|
|
2008
|
8 |
1 |
|
artikel
|
| 42 |
Residue contact-count potentials are as effective as residue-residue contact-type potentials for ranking protein decoys
|
Bolser, Dan M
|
|
2008
|
8 |
1 |
|
artikel
|
| 43 |
SELECTpro: effective protein model selection using a structure-based energy function resistant to BLUNDERs
|
Randall, Arlo
|
|
2008
|
8 |
1 |
|
artikel
|
| 44 |
Solution structure of the Legionella pneumophila Mip-rapamycin complex
|
Ceymann, Andreas
|
|
2008
|
8 |
1 |
|
artikel
|
| 45 |
Statistical analysis of the Bacterial Carbohydrate Structure Data Base (BCSDB): Characteristics and diversity of bacterial carbohydrates in comparison with mammalian glycans
|
Herget, Stephan
|
|
2008
|
8 |
1 |
|
artikel
|
| 46 |
Structural analysis of urate oxidase in complex with its natural substrate inhibited by cyanide: Mechanistic implications
|
Gabison, Laure
|
|
2008
|
8 |
1 |
|
artikel
|
| 47 |
Structural basis of GC-1 selectivity for thyroid hormone receptor isoforms
|
Bleicher, Lucas
|
|
2008
|
8 |
1 |
|
artikel
|
| 48 |
Structural characterization of CA1462, the Candida albicans thiamine pyrophosphokinase
|
Santini, Sébastien
|
|
2008
|
8 |
1 |
|
artikel
|
| 49 |
Structural deformation upon protein-protein interaction: A structural alphabet approach
|
Martin, Juliette
|
|
2008
|
8 |
1 |
|
artikel
|
| 50 |
Structural insights on the pamoic acid and the 8 kDa domain of DNA polymerase beta complex: Towards the design of higher-affinity inhibitors
|
Hazan, Corinne
|
|
2008
|
8 |
1 |
|
artikel
|
| 51 |
Systematic analysis of the effect of multiple templates on the accuracy of comparative models of protein structure
|
Chakravarty, Suvobrata
|
|
2008
|
8 |
1 |
|
artikel
|
| 52 |
The backbone structure of the thermophilic Thermoanaerobacter tengcongensis ribose binding protein is essentially identical to its mesophilic E. coli homolog
|
Cuneo, Matthew J
|
|
2008
|
8 |
1 |
|
artikel
|
| 53 |
The crystal structure of the catalytic domain of a eukaryotic guanylate cyclase
|
Winger, Jonathan A
|
|
2008
|
8 |
1 |
|
artikel
|
| 54 |
The crystal structure of the putative peptide-binding fragment from the human Hsp40 protein Hdj1
|
Hu, Junbin
|
|
2008
|
8 |
1 |
|
artikel
|
| 55 |
Type II restriction endonuclease R.Hpy188I belongs to the GIY-YIG nuclease superfamily, but exhibits an unusual active site
|
Kaminska, Katarzyna H
|
|
2008
|
8 |
1 |
|
artikel
|
Tijdschrift beschrijving