| no |
title |
author |
magazine |
year |
volume |
issue |
page(s) |
type |
| 1 |
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
|
Eddy, Sean R
|
|
2002
|
3 |
1 |
|
article
|
| 2 |
An algorithm and program for finding sequence specific oligo-nucleotide probes for species identification
|
Pozhitkov, Alexander E
|
|
2002
|
3 |
1 |
|
article
|
| 3 |
Automated modelling of signal transduction networks
|
Steffen, Martin
|
|
2002
|
3 |
1 |
|
article
|
| 4 |
Clustering of the SOM easily reveals distinct gene expression patterns: results of a reanalysis of lymphoma study
|
Wang, Junbai
|
|
2002
|
3 |
1 |
|
article
|
| 5 |
Computational detection of genomic cis-regulatory modules applied to body patterning in the early Drosophila embryo
|
Rajewsky, Nikolaus
|
|
2002
|
3 |
1 |
|
article
|
| 6 |
Computational method for reducing variance with Affymetrix microarrays
|
Welle, Stephen
|
|
2002
|
3 |
1 |
|
article
|
| 7 |
CoreGenes: A computational tool for identifying and cataloging "core" genes in a set of small genomes
|
Zafar, Nikhat
|
|
2002
|
3 |
1 |
|
article
|
| 8 |
Correlating overrepresented upstream motifs to gene expression: a computational approach to regulatory element discovery in eukaryotes
|
Caselle, Michele
|
|
2002
|
3 |
1 |
|
article
|
| 9 |
Development and production of an oligonucleotide MuscleChip: use for validation of ambiguous ESTs
|
Borup, Rehannah HA
|
|
2002
|
3 |
1 |
|
article
|
| 10 |
Efficient Boolean implementation of universal sequence maps (bUSM)
|
Schwacke, John
|
|
2002
|
3 |
1 |
|
article
|
| 11 |
Expression profiling of human renal carcinomas with functional taxonomic analysis
|
Gieseg, Michael A
|
|
2002
|
3 |
1 |
|
article
|
| 12 |
FunSpec: a web-based cluster interpreter for yeast
|
Robinson, Mark D
|
|
2002
|
3 |
1 |
|
article
|
| 13 |
Homology Induction: the use of machine learning to improve sequence similarity searches
|
Karwath, Andreas
|
|
2002
|
3 |
1 |
|
article
|
| 14 |
Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model approach
|
Truong, Kevin
|
|
2002
|
3 |
1 |
|
article
|
| 15 |
Identifying functional relationships among human genes by systematic analysis of biological literature
|
Tao, Yong-Chuan
|
|
2002
|
3 |
1 |
|
article
|
| 16 |
Kangaroo – A pattern-matching program for biological sequences
|
Betel, Doron
|
|
2002
|
3 |
1 |
|
article
|
| 17 |
Making sense of EST sequences by CLOBBing them
|
Parkinson, John
|
|
2002
|
3 |
1 |
|
article
|
| 18 |
Match-Only Integral Distribution (MOID) Algorithm for high-density oligonucleotide array analysis
|
Zhou, Yingyao
|
|
2002
|
3 |
1 |
|
article
|
| 19 |
Microarray results: how accurate are they?
|
Kothapalli, Ravi
|
|
2002
|
3 |
1 |
|
article
|
| 20 |
NBLAST: a cluster variant of BLAST for NxN comparisons
|
Dumontier, Michel
|
|
2002
|
3 |
1 |
|
article
|
| 21 |
Oliz, a suite of Perl scripts that assist in the design of microarrays using 50mer oligonucleotides from the 3' untranslated region
|
Chen, Hao
|
|
2002
|
3 |
1 |
|
article
|
| 22 |
ORFer – retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
|
Büssow, Konrad
|
|
2002
|
3 |
1 |
|
article
|
| 23 |
Prediction of MHC class I binding peptides, using SVMHC
|
Dönnes, Pierre
|
|
2002
|
3 |
1 |
|
article
|
| 24 |
Quantifying robustness of biochemical network models
|
Ma, Lan
|
|
2002
|
3 |
1 |
|
article
|
| 25 |
Re-annotation of genome microbial CoDing-Sequences: finding new genes and inaccurately annotated genes
|
Bocs, Stéphanie
|
|
2002
|
3 |
1 |
|
article
|
| 26 |
RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs
|
Zmasek, Christian M
|
|
2002
|
3 |
1 |
|
article
|
| 27 |
RNA:(guanine-N2) methyltransferases RsmC/RsmD and their homologs revisited – bioinformatic analysis and prediction of the active site based on the uncharacterized Mj0882 protein structure
|
Bujnicki, Janusz M
|
|
2002
|
3 |
1 |
|
article
|
| 28 |
SeqHound: biological sequence and structure database as a platform for bioinformatics research
|
Michalickova, Katerina
|
|
2002
|
3 |
1 |
|
article
|
| 29 |
Simulation of DNA array hybridization experiments and evaluation of critical parameters during subsequent image and data analysis
|
Wierling, Christoph K
|
|
2002
|
3 |
1 |
|
article
|
| 30 |
Sources of variability and effect of experimental approach on expression profiling data interpretation
|
Bakay, Marina
|
|
2002
|
3 |
1 |
|
article
|
| 31 |
Species-specific protein sequence and fold optimizations
|
Dumontier, Michel
|
|
2002
|
3 |
1 |
|
article
|
| 32 |
tacg – a grep for DNA
|
Mangalam, Harry J
|
|
2002
|
3 |
1 |
|
article
|
| 33 |
The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
|
Cannone, Jamie J
|
|
2002
|
3 |
1 |
|
article
|
| 34 |
The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs: Correction
|
Cannone, Jamie J
|
|
2002
|
3 |
1 |
|
article
|
| 35 |
The functional importance of disease-associated mutation
|
Mooney, Sean D
|
|
2002
|
3 |
1 |
|
article
|
| 36 |
The limit fold change model: A practical approach for selecting differentially expressed genes from microarray data
|
Mutch, David M
|
|
2002
|
3 |
1 |
|
article
|
| 37 |
The SGS3 protein involved in PTGS finds a family
|
Bateman, Alex
|
|
2002
|
3 |
1 |
|
article
|
| 38 |
Total sequence decomposition distinguishes functional modules, "molegos" in apurinic/apyrimidinic endonucleases
|
Schein, Catherine H
|
|
2002
|
3 |
1 |
|
article
|
| 39 |
Universal sequence map (USM) of arbitrary discrete sequences
|
Almeida, Jonas S
|
|
2002
|
3 |
1 |
|
article
|
| 40 |
Visualizing the genome: techniques for presenting human genome data and annotations
|
Loraine, Ann E
|
|
2002
|
3 |
1 |
|
article
|
Journal description