| no |
title |
author |
magazine |
year |
volume |
issue |
page(s) |
type |
| 1 |
Acknowledgement
|
|
|
2008
|
|
1 |
p. I-III
nvt p.
|
article
|
| 2 |
Acknowledgement
|
|
|
2017
|
|
1 |
p. iii-iv
|
article
|
| 3 |
Activity and specificity of the human SUV39H2 protein lysine methyltransferase
|
Schuhmacher, Maren Kirstin
|
|
2015
|
|
1 |
p. 55-63
9 p.
|
article
|
| 4 |
A lasp family protein of Ciona intestinalis
|
Terasaki, Asako G.
|
|
2008
|
|
1 |
p. 51-59
9 p.
|
article
|
| 5 |
Alteration of Scn3a expression is mediated via CpG methylation and MBD2 in mouse hippocampus during postnatal development and seizure condition
|
Li, Hai-Jun
|
|
2015
|
|
1 |
p. 1-9
9 p.
|
article
|
| 6 |
Alternatively spliced MBNL1 isoforms exhibit differential influence on enhancing brown adipogenesis
|
Hung, Ching-Sheng
|
|
|
|
1 |
p.
|
article
|
| 7 |
A matter of time — How transient transcription factor interactions create dynamic gene regulatory networks
|
Swift, Joseph
|
|
2017
|
|
1 |
p. 75-83
|
article
|
| 8 |
Analysis of the promoter region of human placenta-specific DSCR4 gene
|
Asai, Satoko
|
|
2008
|
|
1 |
p. 40-50
11 p.
|
article
|
| 9 |
Angiotensin II induced CSF1 transcription is mediated by a crosstalk between different epigenetic factors in vascular endothelial cells
|
Shao, Jing
|
|
|
|
1 |
p. 1-11
|
article
|
| 10 |
A poly-histidine motif of HOXA1 is involved in regulatory interactions with cysteine-rich proteins
|
Marchese, Damien
|
|
|
|
1 |
p.
|
article
|
| 11 |
Architectural RNAs (arcRNAs): A class of long noncoding RNAs that function as the scaffold of nuclear bodies
|
Chujo, Takeshi
|
|
2016
|
|
1 |
p. 139-146
8 p.
|
article
|
| 12 |
AutoFAIR-A portal for automating FAIR assessments for bioinformatics resources
|
Bonello, Joseph
|
|
|
|
1 |
p.
|
article
|
| 13 |
5-Azacytidine engages an IRE1α-EGFR-ERK1/2 signaling pathway that stabilizes the LDL receptor mRNA
|
Mnasri, Nourhen
|
|
2018
|
|
1 |
p. 29-40
|
article
|
| 14 |
Basic mechanism of transcription by RNA polymerase II
|
Svetlov, Vladimir
|
|
2013
|
|
1 |
p. 20-28
9 p.
|
article
|
| 15 |
Basic mechanisms of RNA polymerase II activity and alteration of gene expression in Saccharomyces cerevisiae
|
Kaplan, Craig D.
|
|
2013
|
|
1 |
p. 39-54
16 p.
|
article
|
| 16 |
Bioinformatics tools for lncRNA research
|
Iwakiri, Junichi
|
|
2016
|
|
1 |
p. 23-30
8 p.
|
article
|
| 17 |
Changes in Fluorescence Recovery After Photobleaching (FRAP) as an indicator of SOX9 transcription factor activity
|
Govindaraj, Kannan
|
|
|
|
1 |
p. 107-117
|
article
|
| 18 |
Chemical mechanisms of histone lysine and arginine modifications
|
Smith, Brian C.
|
|
2009
|
|
1 |
p. 45-57
13 p.
|
article
|
| 19 |
Chromatin loops in gene regulation
|
Kadauke, Stephan
|
|
2009
|
|
1 |
p. 17-25
9 p.
|
article
|
| 20 |
Circular RNAs: Identification, biogenesis and function
|
Ebbesen, Karoline K.
|
|
2016
|
|
1 |
p. 163-168
6 p.
|
article
|
| 21 |
Close to the edge: Heterochromatin at the nucleolar and nuclear peripheries
|
Bizhanova, Aizhan
|
|
|
|
1 |
p.
|
article
|
| 22 |
Clues to long noncoding RNA taxonomy
|
Hirose, Tetsuro
|
|
2016
|
|
1 |
p. 1-2
2 p.
|
article
|
| 23 |
Cohesin and CTCF differentially regulate spatiotemporal runx1 expression during zebrafish development
|
Marsman, Judith
|
|
2014
|
|
1 |
p. 50-61
12 p.
|
article
|
| 24 |
Combinatorial control of plant gene expression
|
Brkljacic, Jelena
|
|
2017
|
|
1 |
p. 31-40
|
article
|
| 25 |
Comprehensive analysis of chromatin signature and transcriptome uncovers functional lncRNAs expressed in nephron progenitor cells
|
Nishikawa, Masaki
|
|
|
|
1 |
p. 58-70
|
article
|
| 26 |
Computational inference of gene regulatory networks: Approaches, limitations and opportunities
|
Banf, Michael
|
|
2017
|
|
1 |
p. 41-52
|
article
|
| 27 |
Coregulatory long non-coding RNA and protein-coding genes in serum starved cells
|
Wang, Fan
|
|
|
|
1 |
p. 84-95
|
article
|
| 28 |
Corrigendum to “The plant heat stress transcription factor (Hsf) family: Structure, function and evolution” [BBAGRM 1819 (2) 104–119]
|
Scharf, Klaus-Dieter
|
|
2018
|
|
1 |
p. 60
|
article
|
| 29 |
CRISPRi-mediated depletion of Spt4 and Spt5 reveals a role for DSIF in the control of HIV latency
|
Krasnopolsky, Simona
|
|
|
|
1 |
p.
|
article
|
| 30 |
Dealing with different conceptions of pollution in the Gene Regulation Knowledge Commons
|
Chatterjee, Anamika
|
|
|
|
1 |
p.
|
article
|
| 31 |
Deletion of an intronic HIF-2α binding site suppresses hypoxia-induced WT1 expression
|
Krueger, Katharina
|
|
|
|
1 |
p. 71-83
|
article
|
| 32 |
Discovery and functional analysis of lncRNAs: Methodologies to investigate an uncharacterized transcriptome
|
Kashi, Kaori
|
|
2016
|
|
1 |
p. 3-15
13 p.
|
article
|
| 33 |
Disease-associated non-coding variants alter NKX2-5 DNA-binding affinity
|
Peña-Martínez, Edwin G.
|
|
|
|
1 |
p.
|
article
|
| 34 |
Disengaging polymerase: Terminating RNA polymerase II transcription in budding yeast
|
Mischo, Hannah E.
|
|
2013
|
|
1 |
p. 174-185
12 p.
|
article
|
| 35 |
Distinct promoters, subjected to epigenetic regulation, drive the expression of two clusterin mRNAs in prostate cancer cells
|
Bonacini, Martina
|
|
2015
|
|
1 |
p. 44-54
11 p.
|
article
|
| 36 |
Diversity, expansion, and evolutionary novelty of plant DNA-binding transcription factor families
|
Lehti-Shiu, Melissa D.
|
|
2017
|
|
1 |
p. 3-20
|
article
|
| 37 |
DNAJB1 stabilizes MDM2 and contributes to cancer cell proliferation in a p53-dependent manner
|
Qi, Min
|
|
2014
|
|
1 |
p. 62-69
8 p.
|
article
|
| 38 |
DNA methylation of the promoter region at the CREB1 binding site is a mechanism for the epigenetic regulation of brain-specific PKMζ
|
Pramio, Dimitrius Tansini
|
|
|
|
1 |
p.
|
article
|
| 39 |
DNA-mounted self-assembly: New approaches for genomic analysis and SNP detection
|
Bichenkova, Elena V.
|
|
2011
|
|
1 |
p. 1-23
23 p.
|
article
|
| 40 |
Drosophila vigilin, DDP1, localises to the cytoplasm and associates to the rough endoplasmic reticulum
|
Batlle, Marta
|
|
2011
|
|
1 |
p. 46-55
10 p.
|
article
|
| 41 |
Dynamic interplay and function of multiple noncoding genes governing X chromosome inactivation
|
Yue, Minghui
|
|
2016
|
|
1 |
p. 112-120
9 p.
|
article
|
| 42 |
Dynamic phosphorylation patterns of RNA polymerase II CTD during transcription
|
Heidemann, Martin
|
|
2013
|
|
1 |
p. 55-62
8 p.
|
article
|
| 43 |
Dynamic transcriptional control of macrophage miRNA signature via inflammation responsive enhancers revealed using a combination of next generation sequencing-based approaches
|
Czimmerer, Zsolt
|
|
2018
|
|
1 |
p. 14-28
|
article
|
| 44 |
Editorial
|
Triezenberg, Steven J.
|
|
2008
|
|
1 |
p. 1-2
2 p.
|
article
|
| 45 |
Editorial Board
|
|
|
2009
|
|
1 |
p. ii-
1 p.
|
article
|
| 46 |
Editorial Board
|
|
|
2014
|
|
1 |
p. i-
1 p.
|
article
|
| 47 |
Editorial Board
|
|
|
2013
|
|
1 |
p. i-
1 p.
|
article
|
| 48 |
Editorial Board
|
|
|
2016
|
|
1 |
p. i-
1 p.
|
article
|
| 49 |
Editorial Board
|
|
|
2015
|
|
1 |
p. i-
1 p.
|
article
|
| 50 |
Editorial Board
|
|
|
2008
|
|
1 |
p. ii-
1 p.
|
article
|
| 51 |
Editorial Board
|
|
|
2018
|
|
1 |
p. ii
|
article
|
| 52 |
Editorial Board
|
|
|
2011
|
|
1 |
p. i-
1 p.
|
article
|
| 53 |
Editorial Board
|
|
|
|
|
1 |
p.
|
article
|
| 54 |
Editorial Board
|
|
|
|
|
1 |
p.
|
article
|
| 55 |
Editorial Board
|
|
|
|
|
1 |
p.
|
article
|
| 56 |
Editorial Board
|
|
|
|
|
1 |
p. ii
|
article
|
| 57 |
Editorial Board
|
|
|
|
|
1 |
p.
|
article
|
| 58 |
Editorial Board
|
|
|
|
|
1 |
p.
|
article
|
| 59 |
Editors
|
|
|
2017
|
|
1 |
p. i
|
article
|
| 60 |
Effective role of Curcumin on expression regulation of EZH2 histone methyltransferase as a dynamic epigenetic factor in osteogenic differentiation of human mesenchymal stem cells
|
Ghorbaninejad, Mahsa
|
|
|
|
1 |
p.
|
article
|
| 61 |
Epigenetic modifications of histones during osteoblast differentiation
|
Adithya, S. Pranav
|
|
|
|
1 |
p.
|
article
|
| 62 |
EP400NL is involved in PD-L1 gene activation by forming a transcriptional coactivator complex
|
Li, Zidong
|
|
|
|
1 |
p.
|
article
|
| 63 |
Erratum to “MacroRNA underdogs in a microRNA world: Evolutionary, regulatory, and biomedical significance of mammalian long non-protein-coding RNA” [Biochem. Biophys. Acta 1799 (2010) 597–615]
|
Lipovich, Leonard
|
|
2011
|
|
1 |
p. 63-
1 p.
|
article
|
| 64 |
Exon 9 skipping of apoptotic caspase-2 pre-mRNA is promoted by SRSF3 through interaction with exon 8
|
Jang, Ha Na
|
|
2014
|
|
1 |
p. 25-32
8 p.
|
article
|
| 65 |
Expanding the p53 regulatory network: LncRNAs take up the challenge
|
Grossi, Elena
|
|
2016
|
|
1 |
p. 200-208
9 p.
|
article
|
| 66 |
Expression of citrate carrier gene is activated by ER stress effectors XBP1 and ATF6α, binding to an UPRE in its promoter
|
Damiano, Fabrizio
|
|
2015
|
|
1 |
p. 23-31
9 p.
|
article
|
| 67 |
ExTRI: Extraction of transcription regulation interactions from literature
|
Vazquez, Miguel
|
|
|
|
1 |
p.
|
article
|
| 68 |
FOXM1: From cancer initiation to progression and treatment
|
Koo, Chuay-Yeng
|
|
2012
|
|
1 |
p. 28-37
10 p.
|
article
|
| 69 |
From why to how; The gene expression knowledge commons
|
Logie, Colin
|
|
|
|
1 |
p.
|
article
|
| 70 |
FTZ-F1 and FOXL2 up-regulate catfish brain aromatase gene transcription by specific binding to the promoter motifs
|
Sridevi, P.
|
|
2012
|
|
1 |
p. 57-66
10 p.
|
article
|
| 71 |
Functional characterization of the human translocator protein (18kDa) gene promoter in human breast cancer cell lines
|
Batarseh, Amani
|
|
2012
|
|
1 |
p. 38-56
19 p.
|
article
|
| 72 |
Functions of plants long non-coding RNAs
|
Shafiq, Sarfraz
|
|
2016
|
|
1 |
p. 155-162
8 p.
|
article
|
| 73 |
Gene-regulatory networks controlling inflorescence and flower development in Arabidopsis thaliana
|
Wils, Christopher Ralf
|
|
2017
|
|
1 |
p. 95-105
|
article
|
| 74 |
Genes on B chromosomes: Old questions revisited with new tools
|
Banaei-Moghaddam, Ali M.
|
|
2015
|
|
1 |
p. 64-70
7 p.
|
article
|
| 75 |
Genome-wide identification of hypoxia-inducible factor-1 and -2 binding sites in hypoxic human macrophages alternatively activated by IL-10
|
Tausendschön, Michaela
|
|
2015
|
|
1 |
p. 10-22
13 p.
|
article
|
| 76 |
Genome-wide survey identifies TNNI2 as a target of KLF7 that inhibits chicken adipogenesis via downregulating FABP4
|
Sun, Yingning
|
|
|
|
1 |
p.
|
article
|
| 77 |
Glucocorticoids uncover a critical role for ASH2L on BCL-X expression regulation in leukemia cells
|
Rocha-Viegas, Luciana
|
|
|
|
1 |
p.
|
article
|
| 78 |
G-quadruplex deconvolution with physiological mimicry enhances primary screening: Optimizing the FRET Melt2 assay
|
Morgan, Rhianna K.
|
|
|
|
1 |
p.
|
article
|
| 79 |
HDAC11 is a regulator of diverse immune functions
|
Yanginlar, Cansu
|
|
2018
|
|
1 |
p. 54-59
|
article
|
| 80 |
Hereditary Vitamin D-Resistant Rickets (HVDRR) associated SNP variants of vitamin D receptor exhibit malfunctioning at multiple levels
|
Kashyap, Jyoti
|
|
|
|
1 |
p.
|
article
|
| 81 |
Heterogeneous ribonucleoprotein F regulates YAP expression via a G-tract in 3′UTR
|
Chu, Wing-Keung
|
|
|
|
1 |
p. 12-24
|
article
|
| 82 |
Histone acetyltransferase 1 (HAT1) acetylates hypoxia-inducible factor 2 alpha (HIF2A) to execute hypoxia response
|
Kumar, Naveen
|
|
|
|
1 |
p.
|
article
|
| 83 |
Histone modifying enzymes: Structures, mechanisms, and specificities
|
Marmorstein, Ronen
|
|
2009
|
|
1 |
p. 58-68
11 p.
|
article
|
| 84 |
Histone variants in plant transcriptional regulation
|
Jiang, Danhua
|
|
2017
|
|
1 |
p. 123-130
|
article
|
| 85 |
Human ALKBH3-induced m1A demethylation increases the CSF-1 mRNA stability in breast and ovarian cancer cells
|
Woo, Ho-Hyung
|
|
|
|
1 |
p. 35-46
|
article
|
| 86 |
Human chromosome fragility
|
Lukusa, T.
|
|
2008
|
|
1 |
p. 3-16
14 p.
|
article
|
| 87 |
Human CpG binding protein interacts with MLL1, MLL2 and hSet1 and regulates Hox gene expression
|
Ansari, Khairul I.
|
|
2008
|
|
1 |
p. 66-73
8 p.
|
article
|
| 88 |
Identification of a novel alternatively spliced isoform of the ribosomal uL10 protein
|
Filipek, Kamil
|
|
|
|
1 |
p.
|
article
|
| 89 |
Identification of essential intron sequences that enhance gene expression independently of splicing in the yeast Saccharomyces cerevisiae
|
Kikuta, Hiroki
|
|
|
|
1 |
p.
|
article
|
| 90 |
Identification of plant transcription factor target sequences
|
Franco-Zorrilla, José M.
|
|
2017
|
|
1 |
p. 21-30
|
article
|
| 91 |
Identification of two E-boxes that negatively modulate the activity of MyoD on the alpha-sarcoglycan core promoter
|
Delgado-Olguín, Paul
|
|
2008
|
|
1 |
p. 74-80
7 p.
|
article
|
| 92 |
Influence of cell volume on the gene transcription rate
|
Pérez-Ortín, José E.
|
|
|
|
1 |
p.
|
article
|
| 93 |
Insight into lncRNA biology using hybridization capture analyses
|
Simon, Matthew D.
|
|
2016
|
|
1 |
p. 121-127
7 p.
|
article
|
| 94 |
Insight into the mechanism of AML del(9q) progression: hnRNP K targets the myeloid master regulators CEBPA (C/EBPα) and SPI1 (PU.1)
|
Rahn, Kerstin
|
|
|
|
1 |
p.
|
article
|
| 95 |
Insights on the biological functions and diverse regulation of RNA-binding protein 39 and their implication in human diseases
|
Eléouët, Morgane
|
|
|
|
1 |
p.
|
article
|
| 96 |
Isolation and characterisation of promoters from mouse genome to drive post-meiotic germ cell-specific robust gene expression for functional genomics studies
|
Das, Abhishek
|
|
|
|
1 |
p.
|
article
|
| 97 |
Killing two birds with one stone: Model plant systems as a tool to teach the fundamental concepts of gene expression while analyzing biological data
|
Makarevitch, Irina
|
|
2017
|
|
1 |
p. 166-173
|
article
|
| 98 |
Lessons from reverse-genetic studies of lncRNAs
|
Nakagawa, Shinichi
|
|
2016
|
|
1 |
p. 177-183
7 p.
|
article
|
| 99 |
LncRNA lncAY is upregulated by sulfatide via Myb/MEF2C acetylation to promote the tumorigenicity of hepatocellular carcinoma cells
|
Chen, Mei Hua
|
|
|
|
1 |
p.
|
article
|
| 100 |
lncRNAs and microRNAs with a role in cancer development
|
Liz, Julia
|
|
2016
|
|
1 |
p. 169-176
8 p.
|
article
|
| 101 |
Long noncoding RNAs in diseases of aging
|
Kim, Jiyoung
|
|
2016
|
|
1 |
p. 209-221
13 p.
|
article
|
| 102 |
Long noncoding RNAs: Lessons from genomic imprinting
|
Kanduri, Chandrasekhar
|
|
2016
|
|
1 |
p. 102-111
10 p.
|
article
|
| 103 |
Long noncoding RNAs: Re-writing dogmas of RNA processing and stability
|
Wilusz, Jeremy E.
|
|
2016
|
|
1 |
p. 128-138
11 p.
|
article
|
| 104 |
Long-range DNA interactions are specifically altered by locked nucleic acid-targeting of a CTCF binding site
|
Ling, Jian Qun
|
|
2011
|
|
1 |
p. 24-33
10 p.
|
article
|
| 105 |
MALAT1 long non-coding RNA in cancer
|
Yoshimoto, Rei
|
|
2016
|
|
1 |
p. 192-199
8 p.
|
article
|
| 106 |
Matching mouse models to specific human liver disease states by comparative functional genomics of mouse and human datasets
|
Cokan, Kaja Blagotinšek
|
|
|
|
1 |
p.
|
article
|
| 107 |
Mechanism of transcription through a nucleosome by RNA polymerase II
|
Kulaeva, Olga I.
|
|
2013
|
|
1 |
p. 76-83
8 p.
|
article
|
| 108 |
Metabolic substrates, histone modifications, and heart failure
|
Huang, Zihang
|
|
|
|
1 |
p.
|
article
|
| 109 |
Methods for distinguishing between protein-coding and long noncoding RNAs and the elusive biological purpose of translation of long noncoding RNAs
|
Housman, Gali
|
|
2016
|
|
1 |
p. 31-40
10 p.
|
article
|
| 110 |
MicroRNA-27a-3p targeting Vangl1 and Vangl2 inhibits cell proliferation in mouse granulosa cells
|
Tao, Hu
|
|
|
|
1 |
p.
|
article
|
| 111 |
Modulation of Krüppel-like factors (KLFs) interaction with their binding partners in cancers through acetylation and phosphorylation
|
Jha, Kanupriya
|
|
|
|
1 |
p.
|
article
|
| 112 |
Modulation of vitamin D signaling by the pioneer factor CEBPA
|
Nurminen, Veijo
|
|
|
|
1 |
p. 96-106
|
article
|
| 113 |
Molecular basis of transcriptional pausing, stalling, and transcription-coupled repair initiation
|
Oh, Juntaek
|
|
|
|
1 |
p.
|
article
|
| 114 |
Molecular insights of Hippo signaling in the chick developing lung
|
Barbosa, Violina Baranauskaite
|
|
|
|
1 |
p.
|
article
|
| 115 |
Monodehydroascorbate reductase gene, regulated by the wheat PN-2013 miRNA, contributes to adult wheat plant resistance to stripe rust through ROS metabolism
|
Feng, Hao
|
|
2014
|
|
1 |
p. 1-12
12 p.
|
article
|
| 116 |
More than meets the eye: Emergent properties of transcription factors networks in Arabidopsis
|
Muhammad, Durreshahwar
|
|
2017
|
|
1 |
p. 64-74
|
article
|
| 117 |
mTOR-dependent transcriptional repression of Pdcd4 tumor suppressor in lung cancer cells
|
Vikhreva, P.N.
|
|
2014
|
|
1 |
p. 43-49
7 p.
|
article
|
| 118 |
N/C-degron pathways and inhibitor development for PROTAC applications
|
Wu, Zhibin
|
|
|
|
1 |
p.
|
article
|
| 119 |
News from the plant world: Listening to transcription
|
Grotewold, Erich
|
|
2017
|
|
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Journal description