| nr |
titel |
auteur |
tijdschrift |
jaar |
jaarg. |
afl. |
pagina('s) |
type |
| 1 |
Accessing and distributing EMBL data using CORBA (common object request broker architecture)
|
Wang, Lichun
|
|
2000
|
|
5 |
p. research0010.1-research0010.10
|
artikel
|
| 2 |
A computational model of gene expression reveals early transcriptional events at the subtelomeric regions of the malaria parasite, Plasmodium falciparum
|
Scholz, Matthias
|
|
2008
|
|
5 |
|
artikel
|
| 3 |
A distance difference matrix approach to identifying transcription factors that regulate differential gene expression
|
De Bleser, Pieter
|
|
2007
|
|
5 |
|
artikel
|
| 4 |
Adult monozygotic twins discordant for intra-uterine growth have indistinguishable genome-wide DNA methylation profiles
|
Souren, Nicole YP
|
|
2013
|
|
5 |
|
artikel
|
| 5 |
A global view of gene expression in lithium and zinc treated sea urchin embryos: new components of gene regulatory networks
|
Poustka, Albert J
|
|
2007
|
|
5 |
|
artikel
|
| 6 |
A high resolution map of a cyanobacterial transcriptome
|
Vijayan, Vikram
|
|
2011
|
|
5 |
|
artikel
|
| 7 |
A high-throughput approach to identify genomic variants of bacterial metabolite producers at the single-cell level
|
Binder, Stephan
|
|
2012
|
|
5 |
|
artikel
|
| 8 |
A human functional protein interaction network and its application to cancer data analysis
|
Wu, Guanming
|
|
2010
|
|
5 |
|
artikel
|
| 9 |
Analysis of 14 BAC sequences from the Aedes aegypti genome: a benchmark for genome annotation and assembly
|
Lobo, Neil F
|
|
2007
|
|
5 |
|
artikel
|
| 10 |
An annotation infrastructure for the analysis and interpretation of Affymetrix exon array data
|
Okoniewski, Michał J
|
|
2007
|
|
5 |
|
artikel
|
| 11 |
A new approach for detecting low-level mutations in next-generation sequence data
|
Li, Mingkun
|
|
2012
|
|
5 |
|
artikel
|
| 12 |
A novel exploratory method for visual recombination detection
|
Strimmer, Korbinian
|
|
2003
|
|
5 |
|
artikel
|
| 13 |
A novel family of P-loop NTPases with an unusual phyletic distribution and transmembrane segments inserted within the NTPase domain
|
Aravind, L
|
|
2004
|
|
5 |
|
artikel
|
| 14 |
A novel mode of chromosomal evolution peculiar to filamentous Ascomycete fungi
|
Hane, James K
|
|
2011
|
|
5 |
|
artikel
|
| 15 |
A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure
|
Zuccolo, Andrea
|
|
2011
|
|
5 |
|
artikel
|
| 16 |
A systematic comparative and structural analysis of protein phosphorylation sites based on the mtcPTM database
|
Jiménez, José L
|
|
2007
|
|
5 |
|
artikel
|
| 17 |
A systematic screen reveals new elements acting at the G2/M cell cycle control
|
Navarro, Francisco J
|
|
2012
|
|
5 |
|
artikel
|
| 18 |
Calling on a million minds for community annotation in WikiProteins
|
Mons, Barend
|
|
2008
|
|
5 |
|
artikel
|
| 19 |
Characterizing and measuring bias in sequence data
|
Ross, Michael G
|
|
2013
|
|
5 |
|
artikel
|
| 20 |
Characterizing the expression of the human olfactory receptor gene family using a novel DNA microarray
|
Zhang, Xiaohong
|
|
2007
|
|
5 |
|
artikel
|
| 21 |
cis-Decoder discovers constellations of conserved DNA sequences shared among tissue-specific enhancers
|
Brody, Thomas
|
|
2007
|
|
5 |
|
artikel
|
| 22 |
Clustering gene-expression data with repeated measurements
|
Yeung, Ka Yee
|
|
2003
|
|
5 |
|
artikel
|
| 23 |
Co-evolutionary networks of genes and cellular processes across fungal species
|
Tuller, Tamir
|
|
2009
|
|
5 |
|
artikel
|
| 24 |
Combined histomorphometric and gene-expression profiling applied to toxicology
|
Kriete, Andres
|
|
2003
|
|
5 |
|
artikel
|
| 25 |
Comparative multi-omics systems analysis of Escherichia coli strains B and K-12
|
Yoon, Sung Ho
|
|
2012
|
|
5 |
|
artikel
|
| 26 |
Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths
|
Enk, Jacob
|
|
2011
|
|
5 |
|
artikel
|
| 27 |
Computational challenges in the analysis of ancient DNA
|
Prüfer, Kay
|
|
2010
|
|
5 |
|
artikel
|
| 28 |
Conserved features of cohesin binding along fission yeast chromosomes
|
Schmidt, Christine K
|
|
2009
|
|
5 |
|
artikel
|
| 29 |
Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome
|
Ramani, Arun K
|
|
2005
|
|
5 |
|
artikel
|
| 30 |
Copy number polymorphisms and anticancer pharmacogenomics
|
Gamazon, Eric R
|
|
2011
|
|
5 |
|
artikel
|
| 31 |
CpG island density and its correlations with genomic features in mammalian genomes
|
Han, Leng
|
|
2008
|
|
5 |
|
artikel
|
| 32 |
Decline of nucleotide excision repair capacity in aging Caenorhabditis elegans
|
Meyer, Joel N
|
|
2007
|
|
5 |
|
artikel
|
| 33 |
Detection of evolutionarily stable fragments of cellular pathways by hierarchical clustering of phyletic patterns
|
Glazko, Galina V
|
|
2004
|
|
5 |
|
artikel
|
| 34 |
Dissection of a DNA-damage-induced transcriptional network using a combination of microarrays, RNA interference and computational promoter analysis
|
Elkon, Ran
|
|
2005
|
|
5 |
|
artikel
|
| 35 |
DNA methylation dynamics during intestinal stem cell differentiation reveals enhancers driving gene expression in the villus
|
Kaaij, Lucas TJ
|
|
2013
|
|
5 |
|
artikel
|
| 36 |
Doxycycline-induced expression of sense and inverted-repeat constructs modulates phosphogluconate mutase (Pgm) gene expression in adult Drosophila melanogaster
|
Allikian, Michael J
|
|
2002
|
|
5 |
p. research0021.1-research0021.10
|
artikel
|
| 37 |
Duplication and selection in the evolution of primate β-defensin genes
|
Semple, Colin AM
|
|
2003
|
|
5 |
|
artikel
|
| 38 |
Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
|
Kato, Masaomi
|
|
2009
|
|
5 |
|
artikel
|
| 39 |
Dynamic instability of the major urinary protein gene family revealed by genomic and phenotypic comparisons between C57 and 129 strain mice
|
Mudge, Jonathan M
|
|
2008
|
|
5 |
|
artikel
|
| 40 |
Dynamic reprogramming of chromatin accessibility during Drosophila embryo development
|
Thomas, Sean
|
|
2011
|
|
5 |
|
artikel
|
| 41 |
ELXR: a resource for rapid exon-directed sequence analysis
|
Schageman, Jeoffrey J
|
|
2004
|
|
5 |
|
artikel
|
| 42 |
EMIRGE: reconstruction of full-length ribosomal genes from microbial community short read sequencing data
|
Miller, Christopher S
|
|
2011
|
|
5 |
|
artikel
|
| 43 |
Estrogen, not intrinsic aging, is the major regulator of delayed human wound healing in the elderly
|
Hardman, Matthew J
|
|
2008
|
|
5 |
|
artikel
|
| 44 |
Evidence for natural antisense transcript-mediated inhibition of microRNA function
|
Faghihi, Mohammad Ali
|
|
2010
|
|
5 |
|
artikel
|
| 45 |
Evolution of gene fusions: horizontal transfer versus independent events
|
Yanai, Itai
|
|
2002
|
|
5 |
p. research0024.1-research0024.13
|
artikel
|
| 46 |
Evolution of the core and pan-genome of Streptococcus: positive selection, recombination, and genome composition
|
Lefébure, Tristan
|
|
2007
|
|
5 |
|
artikel
|
| 47 |
Exon arrays provide accurate assessments of gene expression
|
Kapur, Karen
|
|
2007
|
|
5 |
|
artikel
|
| 48 |
Finishing the finished human chromosome 22 sequence
|
Cole, Charlotte G
|
|
2008
|
|
5 |
|
artikel
|
| 49 |
GeneCount: genome-wide calculation of absolute tumor DNA copy numbers from array comparative genomic hybridization data
|
Lyng, Heidi
|
|
2008
|
|
5 |
|
artikel
|
| 50 |
Gene expression analysis of nuclear factor I-A deficient mice indicates delayed brain maturation
|
Wong, Yong Wee
|
|
2007
|
|
5 |
|
artikel
|
| 51 |
Gene expression profiling of human prostate cancer stem cells reveals a pro-inflammatory phenotype and the importance of extracellular matrix interactions
|
Birnie, Richard
|
|
2008
|
|
5 |
|
artikel
|
| 52 |
Gene expression variation in Down's syndrome mice allows prioritization of candidate genes
|
Sultan, Marc
|
|
2007
|
|
5 |
|
artikel
|
| 53 |
GeneHopper: a web-based search engine to link gene-expression platforms through GenBank accession numbers
|
Svensson, B Anders T
|
|
2003
|
|
5 |
|
artikel
|
| 54 |
Genome2D: a visualization tool for the rapid analysis of bacterial transcriptome data
|
Baerends, Richard JS
|
|
2004
|
|
5 |
|
artikel
|
| 55 |
Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)
|
Ming, Ray
|
|
2013
|
|
5 |
|
artikel
|
| 56 |
Genome-scale evidence of the nematode-arthropod clade
|
Dopazo, Hernán
|
|
2005
|
|
5 |
|
artikel
|
| 57 |
Genome-wide analysis of functional sirtuin chromatin targets in yeast
|
Li, Mingguang
|
|
2013
|
|
5 |
|
artikel
|
| 58 |
Genome-wide detection and analysis of homologous recombination among sequenced strains of Escherichia coli
|
Mau, Bob
|
|
2006
|
|
5 |
|
artikel
|
| 59 |
Genome-wide identification of novel expression signatures reveal distinct patterns and prevalence of binding motifs for p53, nuclear factor-κB and other signal transcription factors in head and neck squamous cell carcinoma
|
Yan, Bin
|
|
2007
|
|
5 |
|
artikel
|
| 60 |
Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens
|
Silby, Mark W
|
|
2009
|
|
5 |
|
artikel
|
| 61 |
Genomic diversity of the human intestinal parasite Entamoeba histolytica
|
Weedall, Gareth D
|
|
2012
|
|
5 |
|
artikel
|
| 62 |
Genomic structure of the gene for mouse germ-cell nuclear factor (GCNF). II. Comparison with the genomic structure of the human GCNF gene
|
Süsens, Ute
|
|
2001
|
|
5 |
p. research0017.1-research0017.7
|
artikel
|
| 63 |
Global transcriptional responses of fission and budding yeast to changes in copper and iron levels: a comparative study
|
Rustici, Gabriella
|
|
2007
|
|
5 |
|
artikel
|
| 64 |
GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosis metabolism
|
Beste, Dany JV
|
|
2007
|
|
5 |
|
artikel
|
| 65 |
How many replicates of arrays are required to detect gene expression changes in microarray experiments? A mixture model approach
|
Pan, Wei
|
|
2002
|
|
5 |
p. research0022.1-research0022.10
|
artikel
|
| 66 |
5-Hydroxymethylcytosine is an essential intermediate of active DNA demethylation processes in primary human monocytes
|
Klug, Maja
|
|
2013
|
|
5 |
|
artikel
|
| 67 |
Identification of candidate downstream genes for the homeodomain transcription factor Labial in Drosophila through oligonucleotide-array transcript imaging
|
Leemans, Ronny
|
|
2001
|
|
5 |
p. research0015.1-research0015.9
|
artikel
|
| 68 |
Identification of conserved C2H2 zinc-finger gene families in the Bilateria
|
Knight, Robert D
|
|
2001
|
|
5 |
p. research0016.1-research0016.8
|
artikel
|
| 69 |
Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors
|
Herschkowitz, Jason I
|
|
2007
|
|
5 |
|
artikel
|
| 70 |
Identifying related L1 retrotransposons by analyzing 3' transduced sequences
|
Szak, Suzanne T
|
|
2003
|
|
5 |
|
artikel
|
| 71 |
Inactive or moderately active human promoters are enriched for inter-individual epialleles
|
Gemma, Carolina
|
|
2013
|
|
5 |
|
artikel
|
| 72 |
Individual mRNA expression profiles reveal the effects of specific microRNAs
|
Arora, Amit
|
|
2008
|
|
5 |
|
artikel
|
| 73 |
Inferring transcriptional modules from ChIP-chip, motif and microarray data
|
Lemmens, Karen
|
|
2006
|
|
5 |
|
artikel
|
| 74 |
Influence of metabolic network structure and function on enzyme evolution
|
Vitkup, Dennis
|
|
2006
|
|
5 |
|
artikel
|
| 75 |
Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing
|
Kishore, Shivendra
|
|
2013
|
|
5 |
|
artikel
|
| 76 |
Insights into the regulation of intrinsically disordered proteins in the human proteome by analyzing sequence and gene expression data
|
Edwards, Yvonne JK
|
|
2009
|
|
5 |
|
artikel
|
| 77 |
Integrated analysis of recurrent properties of cancer genes to identify novel drivers
|
D'Antonio, Matteo
|
|
2013
|
|
5 |
|
artikel
|
| 78 |
Intron gain and loss in segmentally duplicated genes in rice
|
Lin, Haining
|
|
2006
|
|
5 |
|
artikel
|
| 79 |
Lateral gene transfer and parallel evolution in the history of glutathione biosynthesis genes
|
Copley, Shelley D
|
|
2002
|
|
5 |
p. research0025.1-research0025.16
|
artikel
|
| 80 |
Longitudinal, genome-scale analysis of DNA methylation in twins from birth to 18 months of age reveals rapid epigenetic change in early life and pair-specific effects of discordance
|
Martino, David
|
|
2013
|
|
5 |
|
artikel
|
| 81 |
Loss of genes implicated in gastric function during platypus evolution
|
Ordoñez, Gonzalo R
|
|
2008
|
|
5 |
|
artikel
|
| 82 |
Mammalian tissues defective in nonsense-mediated mRNA decay display highly aberrant splicing patterns
|
Weischenfeldt, Joachim
|
|
2012
|
|
5 |
|
artikel
|
| 83 |
Microarray profile of differentially expressed genes in a monkey model of allergic asthma
|
Zou, Jun
|
|
2002
|
|
5 |
p. research0020.1-research0020.13
|
artikel
|
| 84 |
Microbial signaling and systems biology
|
Brown, Alistair JP
|
|
2010
|
|
5 |
|
artikel
|
| 85 |
Modeling non-uniformity in short-read rates in RNA-Seq data
|
Li, Jun
|
|
2010
|
|
5 |
|
artikel
|
| 86 |
Modular architecture of protein structures and allosteric communications: potential implications for signaling proteins and regulatory linkages
|
del Sol, Antonio
|
|
2007
|
|
5 |
|
artikel
|
| 87 |
Modular organization in the reductive evolution of protein-protein interaction networks
|
Tamames, Javier
|
|
2007
|
|
5 |
|
artikel
|
| 88 |
Modulated contact frequencies at gene-rich loci support a statistical helix model for mammalian chromatin organization
|
Court, Franck
|
|
2011
|
|
5 |
|
artikel
|
| 89 |
Monitoring of gene knockouts: genome-wide profiling of conditionally essential genes
|
Smith, Lisa K
|
|
2007
|
|
5 |
|
artikel
|
| 90 |
MotifAdjuster: a tool for computational reassessment of transcription factor binding site annotations
|
Keilwagen, Jens
|
|
2009
|
|
5 |
|
artikel
|
| 91 |
Moving pictures of the human microbiome
|
Caporaso, J Gregory
|
|
2011
|
|
5 |
|
artikel
|
| 92 |
Multi-tissue coexpression networks reveal unexpected subnetworks associated with disease
|
Dobrin, Radu
|
|
2009
|
|
5 |
|
artikel
|
| 93 |
Multi-tissue gene-expression analysis in a mouse model of thyroid hormone resistance
|
Miller, Lance D
|
|
2004
|
|
5 |
|
artikel
|
| 94 |
Mutations within lncRNAs are effectively selected against in fruitfly but not in human
|
Haerty, Wilfried
|
|
2013
|
|
5 |
|
artikel
|
| 95 |
Nanoarchaea: representatives of a novel archaeal phylum or a fast-evolving euryarchaeal lineage related to Thermococcales?
|
Brochier, Celine
|
|
2005
|
|
5 |
|
artikel
|
| 96 |
ngLOC: an n-gram-based Bayesian method for estimating the subcellular proteomes of eukaryotes
|
King, Brian R
|
|
2007
|
|
5 |
|
artikel
|
| 97 |
Nucleosome rotational setting is associated with transcriptional regulation in promoters of tissue-specific human genes
|
Hebert, Charles
|
|
2010
|
|
5 |
|
artikel
|
| 98 |
Optimization and clinical validation of a pathogen detection microarray
|
Wong, Christopher W
|
|
2007
|
|
5 |
|
artikel
|
| 99 |
Organization of the pronephric kidney revealed by large-scale gene expression mapping
|
Raciti, Daniela
|
|
2008
|
|
5 |
|
artikel
|
| 100 |
Origin of nascent lineages and the mechanisms used to prime second-strand DNA synthesis in the R1 and R2 retrotransposons of Drosophila
|
Stage, Deborah E
|
|
2009
|
|
5 |
|
artikel
|
| 101 |
Orthologous gene-expression profiling in multi-species models: search for candidate genes
|
Grigoryev, Dmitry N
|
|
2004
|
|
5 |
|
artikel
|
| 102 |
Path finding methods accounting for stoichiometry in metabolic networks
|
Pey, Jon
|
|
2011
|
|
5 |
|
artikel
|
| 103 |
Phylogenetic classification of Escherichia coli O157:H7 strains of human and bovine origin using a novel set of nucleotide polymorphisms
|
Clawson, Michael L
|
|
2009
|
|
5 |
|
artikel
|
| 104 |
PI3K signaling and miRNA expression during the response of quiescent human fibroblasts to distinct proliferative stimuli
|
Gu, Jian
|
|
2006
|
|
5 |
|
artikel
|
| 105 |
Prolinks: a database of protein functional linkages derived from coevolution
|
Bowers, Peter M
|
|
2004
|
|
5 |
|
artikel
|
| 106 |
REAPR: a universal tool for genome assembly evaluation
|
Hunt, Martin
|
|
2013
|
|
5 |
|
artikel
|
| 107 |
Refinement of primate copy number variation hotspots identifies candidate genomic regions evolving under positive selection
|
Gokcumen, Omer
|
|
2011
|
|
5 |
|
artikel
|
| 108 |
Regulatory conservation of protein coding and microRNA genes in vertebrates: lessons from the opossum genome
|
Mahony, Shaun
|
|
2007
|
|
5 |
|
artikel
|
| 109 |
Relations in biomedical ontologies
|
Smith, Barry
|
|
2005
|
|
5 |
|
artikel
|
| 110 |
Revealing signaling pathway deregulation by using gene expression signatures and regulatory motif analysis
|
Liu, Yingchun
|
|
2007
|
|
5 |
|
artikel
|
| 111 |
RNA interference is not involved in natural antisense mediated regulation of gene expression in mammals
|
Faghihi, Mohammad Ali
|
|
2006
|
|
5 |
|
artikel
|
| 112 |
Screening the human exome: a comparison of whole genome and whole transcriptome sequencing
|
Cirulli, Elizabeth T
|
|
2010
|
|
5 |
|
artikel
|
| 113 |
Sequence-based prediction of protein-protein interactions by means of codon usage
|
Najafabadi, Hamed Shateri
|
|
2008
|
|
5 |
|
artikel
|
| 114 |
Short RNA half-lives in the slow-growing marine cyanobacterium Prochlorococcus
|
Steglich, Claudia
|
|
2010
|
|
5 |
|
artikel
|
| 115 |
Species-wide distribution of highly polymorphic minisatellite markers suggests past and present genetic exchanges among house mouse subspecies
|
Bonhomme, François
|
|
2007
|
|
5 |
|
artikel
|
| 116 |
Studies on Xenopus laevis intestine reveal biological pathways underlying vertebrate gut adaptation from embryo to adult
|
Heimeier, Rachel A
|
|
2010
|
|
5 |
|
artikel
|
| 117 |
Synthetic lethal analysis of Caenorhabditis elegans posterior embryonic patterning genes identifies conserved genetic interactions
|
Baugh, L Ryan
|
|
2005
|
|
5 |
|
artikel
|
| 118 |
Systemic analysis of the response of Aspergillus niger to ambient pH
|
Andersen, Mikael R
|
|
2009
|
|
5 |
|
artikel
|
| 119 |
The Cell Cycle Ontology: an application ontology for the representation and integrated analysis of the cell cycle process
|
Antezana, Erick
|
|
2009
|
|
5 |
|
artikel
|
| 120 |
The dissection of transcriptional modules regulated by various drugs of abuse in the mouse striatum
|
Piechota, Marcin
|
|
2010
|
|
5 |
|
artikel
|
| 121 |
The gain and loss of genes during 600 million years of vertebrate evolution
|
Blomme, Tine
|
|
2006
|
|
5 |
|
artikel
|
| 122 |
The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation
|
Blanc, Guillaume
|
|
2012
|
|
5 |
|
artikel
|
| 123 |
The genome sequence of the model ascomycete fungus Podospora anserina
|
Espagne, Eric
|
|
2008
|
|
5 |
|
artikel
|
| 124 |
The GOLD domain, a novel protein module involved in Golgi function and secretion
|
Anantharaman, Vivek
|
|
2002
|
|
5 |
p. research0023.1-research0023.7
|
artikel
|
| 125 |
The histone deacetylase Rpd3p is required for transient changes in genomic expression in response to stress
|
Alejandro-Osorio, Adriana L
|
|
2009
|
|
5 |
|
artikel
|
| 126 |
The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo
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